Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna pseudouridine synthase | DF947_20375 | Not Available | Negative | 4603496 - 4604524 | 39166.9 |
| hypothetical protein | DF947_20380 | Not Available | Positive | 4604630 - 4605658 | 36592.2 |
| 1-aminocyclopropane-1-carboxylate deaminase | DF947_20385 | Not Available | Positive | 4605896 - 4606765 | 32463.6 |
| alpha-galactosidase | DF947_20390 | Not Available | Negative | 4606767 - 4608806 | 77416.0 |
| glycoside hydrolase family 2 | DF947_20395 | Not Available | Negative | 4609048 - 4612209 | 121487.0 |
| aminoglycoside phosphotransferase family protein | DF947_20400 | Not Available | Negative | 4612356 - 4613420 | 41251.1 |
| glycosyl hydrolase | DF947_20405 | Not Available | Negative | 4613516 - 4614865 | 50232.6 |
| glycosyl hydrolase family 43 | DF947_20410 | Not Available | Negative | 4615746 - 4616780 | 38971.8 |
| beta-xylosidase | DF947_20415 | Not Available | Negative | 4616793 - 4617737 | 35311.6 |
| asnc family transcriptional regulator | DF947_20420 | Not Available | Negative | 4617819 - 4618286 | 17921.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

