Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine(38-40) synthase trua | DF947_20325 | Not Available | Positive | 4592387 - 4593187 | 30922.3 |
| abc transporter permease | DF947_20330 | Not Available | Negative | 4593343 - 4594563 | 46091.3 |
| duf1343 domain-containing protein | DF947_20335 | Not Available | Positive | 4594742 - 4596007 | 46989.1 |
| hypothetical protein | DF947_20340 | Not Available | Positive | 4596169 - 4596375 | 7709.94 |
| hypothetical protein | DF947_20345 | Not Available | Negative | 4596387 - 4598234 | 69005.2 |
| dna topoisomerase i | DF947_20350 | Not Available | Negative | 4598264 - 4599307 | 39723.2 |
| methionyl-trna formyltransferase | DF947_20355 | Not Available | Positive | 4599398 - 4600306 | 33188.1 |
| hypothetical protein | DF947_20360 | Not Available | Negative | 4600419 - 4601741 | 49847.8 |
| hypothetical protein | DF947_20365 | Not Available | Negative | 4601820 - 4602647 | 31968.7 |
| 4-amino-4-deoxychorismate lyase | DF947_20370 | Not Available | Negative | 4602653 - 4603492 | 31485.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

