Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase | DF947_20075 | Not Available | Negative | 4532061 - 4532567 | 17973.9 |
| thioredoxin domain-containing protein | DF947_20080 | Not Available | Negative | 4532578 - 4534599 | 77305.4 |
| duf1016 domain-containing protein | DF947_20085 | Not Available | Positive | 4534706 - 4535689 | 38679.2 |
| dipeptide epimerase | DF947_20090 | Not Available | Positive | 4535693 - 4536790 | 40910.2 |
| glycoside hydrolase | DF947_20095 | Not Available | Negative | 4536963 - 4537829 | 33778.1 |
| nad(p)-dependent oxidoreductase | DF947_20100 | Not Available | Negative | 4537917 - 4538765 | 29655.7 |
| short-chain dehydrogenase | DF947_20105 | Not Available | Negative | 4538981 - 4539724 | 25718.6 |
| transcriptional regulator | DF947_20110 | Not Available | Positive | 4539828 - 4540178 | 13458.5 |
| duf2235 domain-containing protein | DF947_20115 | Not Available | Positive | 4540288 - 4541367 | 40093.5 |
| mfs transporter | DF947_20120 | Not Available | Positive | 4541535 - 4542767 | 45347.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

