Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prephenate dehydratase | DF947_19720 | Not Available | Positive | 4448880 - 4449713 | 31602.1 |
| 3-deoxy-7-phosphoheptulonate synthase | DF947_19725 | Not Available | Positive | 4449820 - 4450959 | 41860.7 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | DF947_19730 | Not Available | Positive | 4451236 - 4452507 | 46256.7 |
| chorismate synthase | DF947_19735 | Not Available | Positive | 4452613 - 4453710 | 38980.5 |
| duf1684 domain-containing protein | DF947_19740 | Not Available | Positive | 4453999 - 4454607 | 23508.0 |
| hypothetical protein | DF947_19745 | Not Available | Positive | 4454739 - 4455488 | 28644.6 |
| hypothetical protein | DF947_19750 | Not Available | Negative | 4455493 - 4457847 | 90193.1 |
| transketolase | DF947_19755 | Not Available | Negative | 4458095 - 4460515 | 89747.4 |
| duf1573 domain-containing protein | DF947_19760 | Not Available | Positive | 4460690 - 4461082 | 13833.8 |
| pyridoxal phosphate-dependent aminotransferase | DF947_19765 | Not Available | Positive | 4461145 - 4462344 | 44448.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

