Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DF947_19665 | Not Available | Positive | 4438121 - 4438303 | 6966.33 |
| hypothetical protein | DF947_19670 | Not Available | Positive | 4438409 - 4439818 | 52335.9 |
| crp/fnr family transcriptional regulator | DF947_19675 | Not Available | Positive | 4439929 - 4442619 | 98799.4 |
| had family phosphatase | DF947_19680 | Not Available | Positive | 4442840 - 4443475 | 24402.0 |
| duf962 domain-containing protein | DF947_19685 | Not Available | Positive | 4443485 - 4443805 | 12460.2 |
| proline dehydrogenase | DF947_19690 | Not Available | Negative | 4444098 - 4445282 | 45053.3 |
| rna-binding protein | DF947_19695 | Not Available | Positive | 4445379 - 4445585 | 7468.12 |
| 3-dehydroquinate synthase | DF947_19700 | Not Available | Positive | 4445585 - 4446643 | 39344.0 |
| sterol desaturase family protein | DF947_19705 | Not Available | Positive | 4446645 - 4447607 | 37777.8 |
| hypothetical protein | DF947_19710 | Not Available | Positive | 4447924 - 4448115 | 7025.63 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

