Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | DF947_19365 | Not Available | Negative | 4371046 - 4371735 | 25030.3 |
| membrane protein insertion efficiency factor yidd | DF947_19370 | Not Available | Negative | 4371796 - 4372026 | 8701.82 |
| ribonuclease p protein component | DF947_19375 | Not Available | Negative | 4372010 - 4372408 | 16051.6 |
| 50s ribosomal protein l34 | DF947_19380 | Not Available | Negative | 4372476 - 4372634 | 6263.67 |
| dna-binding response regulator | DF947_19385 | Not Available | Negative | 4372790 - 4373524 | 27483.4 |
| sensor histidine kinase | DF947_19390 | Not Available | Negative | 4373502 - 4374533 | 39423.0 |
| hypothetical protein | DF947_19395 | Not Available | Negative | 4374570 - 4374905 | 12839.3 |
| hypothetical protein | DF947_19400 | Not Available | Negative | 4374917 - 4375681 | 27933.9 |
| hypothetical protein | DF947_19405 | Not Available | Positive | 4375812 - 4376684 | 33143.0 |
| large conductance mechanosensitive channel protein mscl | DF947_19410 | Not Available | Negative | 4376723 - 4377112 | 13676.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

