Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long-chain fatty acid--coa ligase | DF947_19265 | Not Available | Positive | 4351173 - 4353089 | 71885.0 |
| lysine--trna ligase | DF947_19270 | Not Available | Positive | 4353211 - 4354920 | 64903.9 |
| hypothetical protein | DF947_19275 | Not Available | Positive | 4355047 - 4355259 | 8327.87 |
| general stress protein | DF947_19280 | Not Available | Negative | 4355345 - 4355899 | 20389.9 |
| hypothetical protein | DF947_19285 | Not Available | Positive | 4356141 - 4356632 | 18953.2 |
| hypothetical protein | DF947_19290 | Not Available | Negative | 4356810 - 4357349 | 20569.9 |
| thioredoxin | DF947_19295 | Not Available | Positive | 4357465 - 4357983 | 19322.9 |
| uracil-dna glycosylase | DF947_19300 | Not Available | Positive | 4357993 - 4358667 | 25046.9 |
| gxxexxy protein | DF947_19305 | Not Available | Positive | 4358754 - 4359164 | 15693.5 |
| lrp/asnc family transcriptional regulator | DF947_19310 | Not Available | Negative | 4359241 - 4359711 | 18040.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

