Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DF947_18405 | Not Available | Negative | 4155838 - 4157517 | 61600.4 |
| thioredoxin | DF947_18410 | Not Available | Negative | 4157635 - 4158768 | 41512.6 |
| hypothetical protein | DF947_18415 | Not Available | Negative | 4158815 - 4160296 | 54702.5 |
| hypothetical protein | DF947_18420 | Not Available | Negative | 4160268 - 4161119 | 32199.7 |
| ragb/susd family nutrient uptake outer membrane protein | DF947_18425 | Not Available | Negative | 4161138 - 4162601 | 55749.4 |
| susc/raga family tonb-linked outer membrane protein | DF947_18430 | Not Available | Negative | 4162612 - 4166040 | 127885.0 |
| anti-sigma factor | DF947_18435 | Not Available | Negative | 4166238 - 4167359 | 41825.0 |
| rna polymerase subunit sigma-70 | DF947_18440 | Not Available | Negative | 4167509 - 4168090 | 22607.4 |
| mechanosensitive ion channel protein | DF947_18445 | Not Available | Negative | 4168224 - 4170563 | 88713.3 |
| hypothetical protein | DF947_18450 | Not Available | Positive | 4170883 - 4171722 | 30596.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

