Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkyl hydroperoxide reductase | DF947_18255 | Not Available | Negative | 4120124 - 4121248 | 41708.6 |
| thioredoxin | DF947_18260 | Not Available | Negative | 4121307 - 4122434 | 41786.2 |
| sialidase | DF947_18265 | Not Available | Negative | 4122565 - 4123542 | 35203.0 |
| ragb/susd family nutrient uptake outer membrane protein | DF947_18270 | Not Available | Negative | 4123560 - 4124930 | 50657.0 |
| susc/raga family tonb-linked outer membrane protein | DF947_18275 | Not Available | Negative | 4124941 - 4128540 | 131994.0 |
| hypothetical protein | DF947_18280 | Not Available | Negative | 4128872 - 4129993 | 41572.7 |
| rna polymerase subunit sigma-70 | DF947_18285 | Not Available | Negative | 4130130 - 4130699 | 22263.1 |
| 2-methylisocitrate lyase | DF947_18290 | Not Available | Negative | 4130881 - 4132206 | 49669.2 |
| paraquat-inducible protein a | DF947_18295 | Not Available | Negative | 4132252 - 4133577 | 50005.2 |
| atp-binding protein | DF947_18300 | Not Available | Negative | 4133721 - 4134800 | 41532.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

