Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease hi | DF947_17695 | Not Available | Positive | 4000994 - 4001467 | 17924.5 |
| class 1 fructose-bisphosphatase | DF947_17700 | Not Available | Negative | 4001490 - 4002569 | 39403.4 |
| yfce family phosphodiesterase | DF947_17705 | Not Available | Negative | 4002589 - 4003080 | 18287.0 |
| trna methyltransferase | DF947_17710 | Not Available | Negative | 4003227 - 4003928 | 26476.8 |
| voc family protein | DF947_17715 | Not Available | Negative | 4004005 - 4004388 | 14881.6 |
| phosphoribosylformylglycinamidine synthase | DF947_17720 | Not Available | Positive | 4004702 - 4008370 | 134143.0 |
| energy transducer tonb | DF947_17725 | Not Available | Negative | 4008559 - 4009398 | 31094.8 |
| glutamine synthetase type iii | DF947_17730 | Not Available | Positive | 4009601 - 4011775 | 80972.0 |
| phosphoribosylformylglycinamidine cyclo-ligase | DF947_17735 | Not Available | Positive | 4012614 - 4013795 | 43091.2 |
| hypothetical protein | DF947_17740 | Not Available | Negative | 4013862 - 4014143 | 10694.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

