Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bama | DF947_17335 | Not Available | Positive | 3915123 - 3917666 | 95505.6 |
| hypothetical protein | DF947_17340 | Not Available | Positive | 3917766 - 3918296 | 20472.6 |
| hypothetical protein | DF947_17345 | Not Available | Positive | 3918360 - 3918938 | 20523.5 |
| glutamate racemase | DF947_17350 | Not Available | Positive | 3919151 - 3919966 | 30381.4 |
| hypothetical protein | DF947_17355 | Not Available | Positive | 3920066 - 3920515 | 17272.5 |
| cytochrome-c peroxidase | DF947_17360 | Not Available | Negative | 3920534 - 3921673 | 43062.7 |
| hypothetical protein | DF947_17365 | Not Available | Negative | 3921677 - 3923230 | 59045.0 |
| hypothetical protein | DF947_17370 | Not Available | Negative | 3923258 - 3924589 | 48412.3 |
| hypothetical protein | DF947_17375 | Not Available | Negative | 3924593 - 3927334 | 100956.0 |
| amidophosphoribosyltransferase | DF947_17380 | Not Available | Positive | 3927590 - 3929491 | 72182.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

