Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transketolase | DF947_17235 | Not Available | Negative | 3893898 - 3894743 | 30813.6 |
| thioredoxin-dependent thiol peroxidase | DF947_17240 | Not Available | Negative | 3894801 - 3895265 | 17070.2 |
| m23 family peptidase | DF947_17245 | Not Available | Negative | 3895511 - 3897244 | 63956.9 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | DF947_17250 | Not Available | Negative | 3897248 - 3897859 | 23091.6 |
| t9ss c-terminal target domain-containing protein | DF947_17255 | Not Available | Negative | 3897932 - 3898411 | 17404.3 |
| potassium transporter kup | DF947_17260 | Not Available | Positive | 3898646 - 3900649 | 74940.9 |
| amino acid permease | DF947_17265 | Not Available | Negative | 3900932 - 3902881 | 71024.8 |
| mfs transporter | DF947_17270 | Not Available | Positive | 3903180 - 3904403 | 45097.5 |
| m3 family oligoendopeptidase | DF947_17275 | Not Available | Negative | 3904548 - 3906254 | 65956.1 |
| 4-hydroxybenzoate octaprenyltransferase | DF947_17280 | Not Available | Negative | 3906275 - 3907138 | 32162.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

