Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbamoyl phosphate synthase small subunit | DF947_17135 | Not Available | Negative | 3870311 - 3871423 | 41142.0 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | DF947_17140 | Not Available | Positive | 3871715 - 3872530 | 29619.8 |
| rna pseudouridine synthase | DF947_17145 | Not Available | Positive | 3872601 - 3873287 | 26081.5 |
| hypothetical protein | DF947_17150 | Not Available | Positive | 3873450 - 3873875 | 15246.7 |
| hypothetical protein | DF947_17155 | Not Available | Negative | 3873926 - 3874396 | 17178.2 |
| glucosylceramidase | DF947_17160 | Not Available | Negative | 3874526 - 3875971 | 52103.0 |
| ragb/susd family nutrient uptake outer membrane protein | DF947_17165 | Not Available | Negative | 3876348 - 3877763 | 52114.4 |
| tonb-dependent receptor | DF947_17170 | Not Available | Negative | 3877775 - 3880687 | 105551.0 |
| chromosome partitioning protein para | DF947_17175 | Not Available | Negative | 3880978 - 3882882 | 74189.2 |
| sensor histidine kinase | DF947_17180 | Not Available | Negative | 3882946 - 3884250 | 50064.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

