Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase subunit sigma-24 | DF947_16780 | Not Available | Positive | 3777283 - 3777870 | 22796.6 |
| anti-sigma factor | DF947_16785 | Not Available | Positive | 3777963 - 3779141 | 44030.7 |
| susc/raga family tonb-linked outer membrane protein | DF947_16790 | Not Available | Positive | 3779603 - 3782632 | 110918.0 |
| ragb/susd family nutrient uptake outer membrane protein | DF947_16795 | Not Available | Positive | 3782644 - 3784035 | 50722.2 |
| cyanophycinase | DF947_16800 | Not Available | Positive | 3784090 - 3785187 | 39458.6 |
| beta-aspartyl-peptidase | DF947_16805 | Not Available | Positive | 3785194 - 3786219 | 35913.3 |
| cyanophycinase | DF947_16810 | Not Available | Positive | 3786219 - 3787061 | 30808.5 |
| hypothetical protein | DF947_16815 | Not Available | Negative | 3787385 - 3788665 | 48538.3 |
| ragb/susd family nutrient uptake outer membrane protein | DF947_16820 | Not Available | Negative | 3788678 - 3790225 | 57298.1 |
| susc/raga family tonb-linked outer membrane protein | DF947_16825 | Not Available | Negative | 3790236 - 3793730 | 129557.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

