Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate dehydrogenase | DF947_16730 | Not Available | Negative | 3763420 - 3764505 | 39117.7 |
| bacillithiol biosynthesis cysteine-adding enzyme bshc | DF947_16735 | Not Available | Negative | 3764564 - 3766153 | 60672.4 |
| lipase | DF947_16740 | Not Available | Negative | 3766334 - 3767284 | 34771.9 |
| hypothetical protein | DF947_16745 | Not Available | Negative | 3767290 - 3767610 | 11970.6 |
| tonb-dependent receptor | DF947_16750 | Not Available | Positive | 3767915 - 3770689 | 98900.5 |
| atp-dependent rna helicase | DF947_16755 | Not Available | Negative | 3771107 - 3773011 | 70220.2 |
| pseudouridylate synthase | DF947_16760 | Not Available | Negative | 3773159 - 3773947 | 30024.0 |
| hypothetical protein | DF947_16765 | Not Available | Negative | 3773970 - 3774437 | 17264.8 |
| trna pseudouridine(38-40) synthase trua | DF947_16770 | Not Available | Positive | 3774629 - 3775387 | 28688.4 |
| antibiotic abc transporter atp-binding protein | DF947_16775 | Not Available | Positive | 3775474 - 3777246 | 66839.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

