Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-thr | Not Available | Not Available | Positive | 3620886 - 3620958 | Not Available |
| hypothetical protein | DF947_16170 | Not Available | Negative | 3621167 - 3621466 | 11574.0 |
| hypothetical protein | DF947_16175 | Not Available | Positive | 3621524 - 3621838 | 11360.6 |
| hypothetical protein | DF947_16180 | Not Available | Positive | 3621959 - 3622273 | 11288.6 |
| sigma-54-dependent fis family transcriptional regulator | DF947_16185 | Not Available | Positive | 3622343 - 3623674 | 49255.4 |
| hybrid sensor histidine kinase/response regulator | DF947_16190 | Not Available | Negative | 3623808 - 3626285 | 94148.1 |
| yafy family transcriptional regulator | DF947_16195 | Not Available | Positive | 3626485 - 3627174 | 26739.5 |
| damage-inducible protein dinb | DF947_16200 | Not Available | Positive | 3627479 - 3627976 | 18686.2 |
| flavoprotein | DF947_16205 | Not Available | Positive | 3628063 - 3628593 | 19450.4 |
| 23s rrna pseudouridine(2604) synthase rluf | DF947_16210 | Not Available | Positive | 3628627 - 3629601 | 36119.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

