Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DF947_16065 | Not Available | Negative | 3590485 - 3593277 | 101441.0 |
| glycine cleavage system protein h | DF947_16070 | Not Available | Negative | 3593536 - 3593934 | 15477.3 |
| glycine cleavage system protein gcvh | DF947_16075 | Not Available | Negative | 3593948 - 3594328 | 13675.9 |
| cell surface protein spra | DF947_16080 | Not Available | Negative | 3594417 - 3601601 | 269475.0 |
| holliday junction branch migration protein ruva | DF947_16085 | Not Available | Negative | 3601613 - 3602197 | 21260.0 |
| nadp-dependent malic enzyme | DF947_16090 | Not Available | Negative | 3602201 - 3604516 | 84291.6 |
| phospholipase c, phosphocholine-specific | DF947_16095 | Not Available | Negative | 3604678 - 3607206 | 95047.1 |
| lytic transglycosylase | DF947_16100 | Not Available | Negative | 3607306 - 3608715 | 52748.8 |
| asp-trna(asn)/glu-trna(gln) amidotransferase gatcab subunit a | DF947_16105 | Not Available | Negative | 3608841 - 3610259 | 51625.6 |
| twin-arginine translocase tata/tate family subunit | DF947_16110 | Not Available | Negative | 3610278 - 3610454 | 6222.76 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

