Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen-iii synthase | DF947_15665 | Not Available | Negative | 3496233 - 3497003 | 29319.2 |
| duf4271 domain-containing protein | DF947_15670 | Not Available | Negative | 3497018 - 3497995 | 37466.0 |
| coproporphyrinogen iii oxidase | DF947_15675 | Not Available | Positive | 3498092 - 3499222 | 42894.9 |
| short chain dehydrogenase | DF947_15680 | Not Available | Positive | 3499316 - 3500098 | 28253.4 |
| fasciclin | DF947_15685 | Not Available | Positive | 3500411 - 3500962 | 19293.7 |
| heme oxygenase | DF947_15690 | Not Available | Positive | 3501149 - 3501934 | 29855.5 |
| cupin | DF947_15695 | Not Available | Positive | 3502066 - 3502944 | 33782.8 |
| maltose o-acetyltransferase | DF947_15700 | Not Available | Positive | 3503134 - 3503736 | 22545.2 |
| duf4440 domain-containing protein | DF947_15705 | Not Available | Negative | 3503852 - 3504277 | 16064.5 |
| carbohydrate kinase | DF947_15710 | Not Available | Positive | 3504369 - 3505250 | 32362.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

