Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prevent-host-death protein | DF947_15365 | Not Available | Negative | 3422164 - 3422439 | 10235.2 |
| preprotein translocase subunit seca | DF947_15370 | Not Available | Negative | 3422639 - 3425941 | 123794.0 |
| hypothetical protein | DF947_15375 | Not Available | Negative | 3426079 - 3426447 | 13883.0 |
| intradiol ring-cleavage dioxygenase | DF947_15380 | Not Available | Positive | 3426631 - 3427362 | 25339.7 |
| hypothetical protein | DF947_15385 | Not Available | Positive | 3427432 - 3427938 | 19722.7 |
| hypothetical protein | DF947_15390 | Not Available | Positive | 3427940 - 3428644 | 26552.9 |
| dna mismatch repair protein muts | DF947_15395 | Not Available | Negative | 3429055 - 3430005 | 35549.4 |
| ribosome small subunit-dependent gtpase a | DF947_15400 | Not Available | Negative | 3430196 - 3431116 | 34193.1 |
| bifunctional aspartate kinase/homoserine dehydrogenase i | DF947_15405 | Not Available | Positive | 3432424 - 3434877 | 89375.1 |
| homoserine kinase | DF947_15410 | Not Available | Positive | 3435046 - 3435993 | 33559.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

