Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-val | Not Available | Not Available | Positive | 3294163 - 3294240 | Not Available |
| isoleucyl-trna synthetase | DF947_14870 | Not Available | Negative | 3294877 - 3295149 | 9918.4 |
| isoleucine--trna ligase | DF947_14875 | Not Available | Positive | 3295418 - 3298864 | 131233.0 |
| molecular chaperone dnak | DF947_14880 | Not Available | Positive | 3298899 - 3299282 | 14351.9 |
| lipoprotein signal peptidase | DF947_14885 | Not Available | Positive | 3299282 - 3299884 | 22820.0 |
| duf2809 domain-containing protein | DF947_14890 | Not Available | Negative | 3300083 - 3300442 | 13952.7 |
| dihydrolipoyllysine-residue succinyltransferase | DF947_14895 | Not Available | Negative | 3300629 - 3301855 | 43415.6 |
| 2-oxoglutarate dehydrogenase e1 component | DF947_14900 | Not Available | Negative | 3301981 - 3304779 | 105152.0 |
| dash family cryptochrome | DF947_14905 | Not Available | Negative | 3304944 - 3306218 | 48430.1 |
| hypothetical protein | DF947_14910 | Not Available | Positive | 3306392 - 3308011 | 59581.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

