Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DF947_13465 | Not Available | Negative | 3006889 - 3007869 | 37192.6 |
| atpase | DF947_13470 | Not Available | Positive | 3008065 - 3008556 | 19114.6 |
| hypothetical protein | DF947_13475 | Not Available | Positive | 3008684 - 3009367 | 26072.4 |
| cysteine methyltransferase | DF947_13480 | Not Available | Positive | 3009433 - 3010281 | 31571.7 |
| prolyl 4-hydroxylase subunit alpha | DF947_13485 | Not Available | Positive | 3010293 - 3010997 | 26882.4 |
| metal-binding protein | DF947_13490 | Not Available | Positive | 3011000 - 3011248 | 9759.89 |
| alpha-ketoglutarate-dependent dioxygenase alkb | DF947_13495 | Not Available | Positive | 3011224 - 3011829 | 23385.0 |
| hypothetical protein | DF947_13500 | Not Available | Negative | 3012009 - 3012794 | 29219.0 |
| helix-turn-helix transcriptional regulator | DF947_13505 | Not Available | Positive | 3012955 - 3013425 | 18139.0 |
| duf4199 domain-containing protein | DF947_13510 | Not Available | Positive | 3013540 - 3014091 | 20464.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

