Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 1 protein | DF947_12765 | Not Available | Positive | 2862372 - 2863568 | 45783.4 |
| duf4136 domain-containing protein | DF947_12770 | Not Available | Negative | 2863561 - 2864118 | 20804.9 |
| threonylcarbamoyl-amp synthase | DF947_12775 | Not Available | Positive | 2864314 - 2864880 | 20946.3 |
| trna nucleotidyltransferase | DF947_12780 | Not Available | Positive | 2864970 - 2866424 | 55190.7 |
| hypothetical protein | DF947_12785 | Not Available | Positive | 2866532 - 2867179 | 25053.4 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | DF947_12790 | Not Available | Positive | 2867248 - 2868174 | 35329.7 |
| g-d-s-l family lipolytic protein | DF947_12795 | Not Available | Negative | 2868222 - 2869505 | 44740.4 |
| long-chain fatty acid transporter | DF947_12800 | Not Available | Negative | 2869598 - 2870821 | 44050.3 |
| duf3467 domain-containing protein | DF947_12805 | Not Available | Negative | 2870902 - 2871213 | 11517.8 |
| dna-directed rna polymerase subunit beta' | DF947_12810 | Not Available | Negative | 2871355 - 2875641 | 159657.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

