Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad:protein fmn transferase | DF947_12715 | Not Available | Positive | 2852721 - 2853716 | 36903.6 |
| xylose isomerase | DF947_12720 | Not Available | Positive | 2853746 - 2854672 | 34783.6 |
| alpha-amylase | DF947_12725 | Not Available | Negative | 2854842 - 2856332 | 57129.3 |
| dna topoisomerase (atp-hydrolyzing) subunit b | DF947_12730 | Not Available | Negative | 2856520 - 2858478 | 72072.9 |
| hypothetical protein | DF947_12735 | Not Available | Negative | 2858654 - 2858842 | 6981.64 |
| outer membrane chaperone skp | DF947_12740 | Not Available | Positive | 2858958 - 2859554 | 22033.9 |
| pp_02527 | DF947_12745 | Not Available | Positive | 2859622 - 2860104 | Not Available |
| abc transporter-associated protein ecsc | DF947_12750 | Not Available | Positive | 2860164 - 2860934 | 29293.1 |
| rna-binding protein | DF947_12755 | Not Available | Negative | 2860931 - 2861335 | 15235.3 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | DF947_12760 | Not Available | Positive | 2861512 - 2862333 | 29769.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

