Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alcohol dehydrogenase | DF947_01195 | Not Available | Positive | 293834 - 294853 | 37241.0 |
| l-arabinose isomerase | DF947_01200 | Not Available | Negative | 295008 - 296498 | 55270.0 |
| l-ribulose-5-phosphate 4-epimerase | DF947_01205 | Not Available | Negative | 296720 - 297421 | 26040.9 |
| ribulokinase | DF947_01210 | Not Available | Negative | 297418 - 299118 | 62030.4 |
| hybrid sensor histidine kinase/response regulator | DF947_01215 | Not Available | Positive | 299408 - 301759 | 88552.6 |
| response regulator | DF947_01220 | Not Available | Positive | 301836 - 302192 | 13472.6 |
| glycoside hydrolase family 92 protein | DF947_01225 | Not Available | Positive | 302366 - 304519 | 80343.4 |
| rna-binding protein | DF947_01230 | Not Available | Positive | 304642 - 304845 | 7140.66 |
| hydroxyacid dehydrogenase | DF947_01235 | Not Available | Positive | 304960 - 306003 | 37873.5 |
| hypothetical protein | DF947_01240 | Not Available | Negative | 306190 - 306801 | 23122.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

