Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sam-dependent methyltransferase | DF947_12415 | Not Available | Positive | 2796156 - 2796887 | 28684.2 |
| phosphatase pap2 family protein | DF947_12420 | Not Available | Positive | 2796884 - 2797447 | 21357.6 |
| zinc/iron permease | DF947_12425 | Not Available | Positive | 2797449 - 2798168 | 26212.8 |
| uma2 family endonuclease | DF947_12430 | Not Available | Positive | 2798246 - 2798896 | 25260.8 |
| exonuclease | DF947_12435 | Not Available | Negative | 2799195 - 2800139 | 36095.6 |
| dephospho-coa kinase | DF947_12440 | Not Available | Negative | 2800216 - 2800830 | 22698.4 |
| hypothetical protein | DF947_12445 | Not Available | Negative | 2800830 - 2801777 | 36359.1 |
| preprotein translocase subunit yajc | DF947_12450 | Not Available | Negative | 2801982 - 2802293 | 11029.9 |
| duf1573 domain-containing protein | DF947_12455 | Not Available | Negative | 2802354 - 2802800 | 15696.0 |
| transcription antitermination factor nusb | DF947_12460 | Not Available | Negative | 2802857 - 2803807 | 36919.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

