Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DF947_12315 | Not Available | Positive | 2773152 - 2773349 | 7275.89 |
| valine--trna ligase | DF947_12320 | Not Available | Negative | 2773438 - 2776158 | 104258.0 |
| restriction endonuclease | DF947_12325 | Not Available | Negative | 2776390 - 2777025 | 24063.8 |
| cadmium-translocating p-type atpase | DF947_12330 | Not Available | Negative | 2777053 - 2778867 | 65759.3 |
| peptidase m13 | DF947_12335 | Not Available | Positive | 2779608 - 2781644 | 75915.4 |
| hypothetical protein | DF947_12340 | Not Available | Positive | 2781865 - 2782563 | 26168.0 |
| hypothetical protein | DF947_12345 | Not Available | Negative | 2782588 - 2782926 | 12872.5 |
| trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase | DF947_12350 | Not Available | Positive | 2783105 - 2783776 | 24953.7 |
| alcohol dehydrogenase | DF947_12355 | Not Available | Positive | 2783852 - 2784799 | 35614.9 |
| ai-2e family transporter | DF947_12360 | Not Available | Positive | 2784878 - 2785987 | 41289.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

