Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DF947_12115 | Not Available | Positive | 2731603 - 2731977 | 13601.9 |
| nlpc/p60 family protein | DF947_12120 | Not Available | Positive | 2732091 - 2732636 | 19973.0 |
| hypothetical protein | DF947_12125 | Not Available | Negative | 2732640 - 2733245 | 23665.6 |
| flavin reductase | DF947_12130 | Not Available | Negative | 2733271 - 2734158 | 32814.8 |
| duf2238 domain-containing protein | DF947_12135 | Not Available | Negative | 2734160 - 2734759 | 22606.9 |
| fumarylacetoacetate hydrolase | DF947_12140 | Not Available | Negative | 2734761 - 2735759 | 36956.2 |
| hypothetical protein | DF947_12145 | Not Available | Negative | 2735824 - 2736279 | 16431.7 |
| homogentisate 1,2-dioxygenase | DF947_12150 | Not Available | Positive | 2736549 - 2737715 | 44893.2 |
| 4-hydroxyphenylpyruvate dioxygenase | DF947_12155 | Not Available | Positive | 2737846 - 2738976 | 42573.4 |
| hypothetical protein | DF947_12160 | Not Available | Positive | 2739103 - 2739573 | 17436.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

