Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase | DF947_11810 | Not Available | Negative | 2677190 - 2677717 | 19170.2 |
| fe-s assembly protein iscx | DF947_11815 | Not Available | Negative | 2677816 - 2678061 | 9972.44 |
| ferredoxin | DF947_11820 | Not Available | Negative | 2678143 - 2678475 | 12061.3 |
| duf2520 domain-containing protein | DF947_11825 | Not Available | Negative | 2678519 - 2679280 | 27821.4 |
| cytochrome c biogenesis protein | DF947_11830 | Not Available | Negative | 2679325 - 2681790 | 92736.0 |
| cytochrome c biogenesis protein | DF947_11835 | Not Available | Negative | 2681798 - 2682229 | 16258.4 |
| hypothetical protein | DF947_11840 | Not Available | Positive | 2682492 - 2683172 | 25182.2 |
| hypothetical protein | DF947_11845 | Not Available | Positive | 2683223 - 2685244 | 75765.5 |
| hypothetical protein | DF947_11850 | Not Available | Positive | 2685330 - 2686736 | 53392.5 |
| glutamate dehydrogenase | DF947_11855 | Not Available | Negative | 2687182 - 2688603 | 51838.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

