Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DF947_11660 | Not Available | Negative | 2644913 - 2645317 | 15206.2 |
| l,d-transpeptidase | DF947_11665 | Not Available | Negative | 2645336 - 2646898 | 60064.3 |
| atp phosphoribosyltransferase | DF947_11670 | Not Available | Positive | 2647175 - 2648026 | 30749.4 |
| histidinol dehydrogenase | DF947_11675 | Not Available | Positive | 2648086 - 2649408 | 47920.5 |
| histidinol-phosphate transaminase | DF947_11680 | Not Available | Positive | 2649526 - 2650566 | 38720.4 |
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase | DF947_11685 | Not Available | Positive | 2650568 - 2651701 | 42589.8 |
| imidazole glycerol phosphate synthase subunit hish | DF947_11690 | Not Available | Positive | 2651782 - 2652372 | 21576.9 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | DF947_11695 | Not Available | Positive | 2652438 - 2653187 | 28011.1 |
| imidazole glycerol phosphate synthase subunit hisf | DF947_11700 | Not Available | Positive | 2653377 - 2654132 | 27218.0 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase | DF947_11705 | Not Available | Positive | 2654222 - 2654824 | 22595.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

