Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoadenylyl-sulfate reductase | DF947_11510 | Not Available | Negative | 2614785 - 2615507 | 28076.2 |
| siroheme synthase | DF947_11515 | Not Available | Negative | 2615511 - 2617022 | 54810.9 |
| uroporphyrinogen-iii c-methyltransferase | DF947_11520 | Not Available | Negative | 2617006 - 2617776 | 27255.8 |
| nitrite reductase | DF947_11525 | Not Available | Negative | 2617922 - 2620012 | 78303.0 |
| transcriptional regulator | DF947_11530 | Not Available | Negative | 2620364 - 2620810 | 16391.2 |
| hybrid sensor histidine kinase/response regulator | DF947_11535 | Not Available | Positive | 2620939 - 2622711 | 66837.4 |
| phosphohydrolase | DF947_11540 | Not Available | Positive | 2622812 - 2624032 | 46297.1 |
| peptidase m23 | DF947_11545 | Not Available | Positive | 2624106 - 2624732 | 24246.3 |
| hypothetical protein | DF947_11550 | Not Available | Negative | 2624778 - 2625158 | 14111.9 |
| hypothetical protein | DF947_11555 | Not Available | Negative | 2625296 - 2625703 | 15144.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

