Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DF947_11255 | Not Available | Positive | 2560153 - 2560755 | 23384.8 |
| heptosyltransferase | DF947_11260 | Not Available | Positive | 2560834 - 2561865 | 38568.4 |
| histidine phosphatase family protein | DF947_11265 | Not Available | Positive | 2561858 - 2562355 | 18581.2 |
| duf4290 domain-containing protein | DF947_11270 | Not Available | Positive | 2562715 - 2563398 | 26535.4 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | DF947_11275 | Not Available | Positive | 2563488 - 2564813 | 48100.8 |
| cystathionine beta-synthase | DF947_11280 | Not Available | Negative | 2565206 - 2566567 | 49649.5 |
| dna-protecting protein dpra | DF947_11285 | Not Available | Negative | 2566849 - 2567943 | 39969.6 |
| hypothetical protein | DF947_11290 | Not Available | Negative | 2568003 - 2568269 | 10121.2 |
| hypothetical protein | DF947_11295 | Not Available | Negative | 2568413 - 2569918 | 54781.6 |
| haloacid dehalogenase | DF947_11300 | Not Available | Negative | 2569927 - 2570535 | 23889.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

