Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2851 domain-containing protein | DF947_11205 | Not Available | Negative | 2548495 - 2549778 | 49587.8 |
| permease | DF947_11210 | Not Available | Negative | 2550024 - 2550932 | 33405.0 |
| orotidine-5'-phosphate decarboxylase | DF947_11215 | Not Available | Negative | 2551071 - 2551901 | 30911.0 |
| transcription termination factor rho | DF947_11220 | Not Available | Positive | 2552325 - 2554034 | 63549.5 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | DF947_11225 | Not Available | Positive | 2554114 - 2554803 | 25273.5 |
| histidine phosphotransferase | DF947_11230 | Not Available | Negative | 2554810 - 2555187 | 14466.1 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | DF947_11235 | Not Available | Negative | 2555205 - 2555699 | 18642.8 |
| signal peptide peptidase sppa | DF947_11240 | Not Available | Positive | 2555751 - 2557517 | 64889.3 |
| hypothetical protein | DF947_11245 | Not Available | Negative | 2557672 - 2558301 | 22824.3 |
| dna polymerase/3'-5' exonuclease polx | DF947_11250 | Not Available | Positive | 2558390 - 2560078 | 63241.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

