Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylglucosamine-6-phosphate deacetylase | DF947_11055 | Not Available | Positive | 2517167 - 2518264 | 40220.7 |
| ump kinase | DF947_11060 | Not Available | Positive | 2518329 - 2519033 | 25939.8 |
| ribosome recycling factor | DF947_11065 | Not Available | Positive | 2519075 - 2519638 | 20695.0 |
| translation initiation factor if-2 | DF947_11070 | Not Available | Negative | 2519767 - 2522853 | 111139.0 |
| transcription termination/antitermination protein nusa | DF947_11075 | Not Available | Negative | 2522916 - 2524160 | 46984.9 |
| ribosome assembly cofactor rimp | DF947_11080 | Not Available | Negative | 2524208 - 2524672 | 17265.9 |
| hypothetical protein | DF947_11085 | Not Available | Negative | 2524794 - 2525225 | 15678.1 |
| phage holin family protein | DF947_11090 | Not Available | Positive | 2525244 - 2525588 | 12025.6 |
| acyl-coa dehydrogenase | DF947_11095 | Not Available | Negative | 2525726 - 2526865 | 41697.9 |
| hypothetical protein | DF947_11100 | Not Available | Negative | 2527069 - 2528049 | 37051.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

