Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate epimerase | DF947_10030 | Not Available | Positive | 2292716 - 2293498 | 29079.4 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase | DF947_10035 | Not Available | Negative | 2293918 - 2294697 | 29779.1 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | DF947_10040 | Not Available | Positive | 2294854 - 2295933 | 39255.8 |
| hypothetical protein | DF947_10045 | Not Available | Positive | 2296291 - 2296791 | 18411.1 |
| mfs transporter | DF947_10050 | Not Available | Positive | 2296878 - 2298095 | 44352.2 |
| sulfurtransferase | DF947_10055 | Not Available | Positive | 2298064 - 2298903 | 30804.9 |
| hypothetical protein | DF947_10060 | Not Available | Positive | 2299097 - 2299627 | 20507.4 |
| 50s ribosomal protein l32 | DF947_10065 | Not Available | Positive | 2299643 - 2299834 | 7104.6 |
| phosphate acyltransferase plsx | DF947_10070 | Not Available | Positive | 2299936 - 2300874 | 33515.1 |
| 3-oxoacyl-acp synthase | DF947_10075 | Not Available | Positive | 2300884 - 2301879 | 35880.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

