Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DF947_09675 | Not Available | Negative | 2216401 - 2217378 | 37464.3 |
| crossover junction endodeoxyribonuclease ruvc | DF947_09680 | Not Available | Positive | 2217420 - 2218007 | 21449.4 |
| hypothetical protein | DF947_09685 | Not Available | Negative | 2217997 - 2218326 | 12581.0 |
| duf4349 domain-containing protein | DF947_09690 | Not Available | Negative | 2218353 - 2219243 | 33531.6 |
| alpha-ketoglutarate-dependent dioxygenase alkb | DF947_09695 | Not Available | Positive | 2219555 - 2220184 | 23822.6 |
| hypothetical protein | DF947_09700 | Not Available | Positive | 2220184 - 2220636 | 17827.3 |
| hypothetical protein | DF947_09705 | Not Available | Negative | 2220699 - 2220878 | 6059.23 |
| gnat family n-acetyltransferase | DF947_09710 | Not Available | Positive | 2220904 - 2221350 | 17267.8 |
| hypothetical protein | DF947_09715 | Not Available | Positive | 2221489 - 2223417 | 65526.3 |
| hypothetical protein | DF947_09720 | Not Available | Positive | 2223725 - 2225947 | 77944.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

