Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DF947_09575 | Not Available | Positive | 2197986 - 2198297 | 11546.4 |
| serine--trna ligase | DF947_09580 | Not Available | Negative | 2198407 - 2199678 | 47565.8 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | DF947_09585 | Not Available | Positive | 2199788 - 2200507 | 26884.5 |
| hypothetical protein | DF947_09590 | Not Available | Positive | 2200553 - 2201203 | 24638.5 |
| apolipoprotein n-acyltransferase | DF947_09595 | Not Available | Positive | 2201306 - 2202937 | 60974.8 |
| signal peptidase ii | DF947_09600 | Not Available | Positive | 2202948 - 2203481 | 19917.8 |
| osmc family peroxiredoxin | DF947_09605 | Not Available | Positive | 2203585 - 2204001 | 14656.3 |
| luxr family transcriptional regulator | DF947_09610 | Not Available | Negative | 2204047 - 2204733 | 26529.6 |
| nad+ synthase | DF947_09615 | Not Available | Negative | 2204814 - 2206454 | 60986.8 |
| port family protein | DF947_09620 | Not Available | Negative | 2206491 - 2207171 | 24725.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

