Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit c | DF947_09375 | Not Available | Negative | 2157011 - 2157307 | 11579.2 |
| Trna-asn | Not Available | Not Available | Positive | 2157586 - 2157662 | Not Available |
| Trna-asn | Not Available | Not Available | Positive | 2157994 - 2158070 | Not Available |
| sugar kinase | DF947_09390 | Not Available | Positive | 2158216 - 2159136 | 33864.8 |
| cytochrome b5 | DF947_09395 | Not Available | Negative | 2159220 - 2159453 | 9049.71 |
| lycopene cyclase domain-containing protein | DF947_09400 | Not Available | Negative | 2159694 - 2160431 | 28741.8 |
| hypothetical protein | DF947_09405 | Not Available | Negative | 2160432 - 2161058 | 24172.0 |
| phytoene desaturase | DF947_09410 | Not Available | Positive | 2161216 - 2162697 | 56178.7 |
| hypothetical protein | DF947_09415 | Not Available | Negative | 2162973 - 2163170 | 7327.78 |
| rna polymerase subunit sigma | DF947_09420 | Not Available | Negative | 2163154 - 2163684 | 20430.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

