Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DF947_09275 | Not Available | Positive | 2138752 - 2140509 | 66427.3 |
| duf1543 domain-containing protein | DF947_09280 | Not Available | Positive | 2140551 - 2141132 | 21947.1 |
| alpha-mannosidase | DF947_09285 | Not Available | Positive | 2141394 - 2143661 | 85846.7 |
| duf1349 domain-containing protein | DF947_09290 | Not Available | Negative | 2143887 - 2144534 | 25121.3 |
| helix-turn-helix transcriptional regulator | DF947_09295 | Not Available | Positive | 2144695 - 2145447 | 29017.2 |
| tetracycline resistance protein | DF947_09300 | Not Available | Negative | 2145473 - 2146606 | 41888.9 |
| 2-polyprenyl-6-methoxyphenol hydroxylase | DF947_09305 | Not Available | Negative | 2146615 - 2147802 | 44440.2 |
| transcriptional regulator | DF947_09310 | Not Available | Negative | 2147875 - 2148627 | 28795.5 |
| smi1/knr4 family protein | DF947_09315 | Not Available | Negative | 2149145 - 2149585 | 17340.6 |
| dinb superfamily protein | DF947_09320 | Not Available | Negative | 2149578 - 2150039 | 18119.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

