Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dhh family phosphoesterase | DF947_08975 | Not Available | Negative | 2054093 - 2055103 | 37430.4 |
| nucleoside-diphosphate kinase | DF947_08980 | Not Available | Positive | 2055346 - 2055765 | 15224.9 |
| peptidylprolyl isomerase | DF947_08985 | Not Available | Positive | 2055891 - 2056664 | 27560.1 |
| duf721 domain-containing protein | DF947_08990 | Not Available | Negative | 2056992 - 2057282 | 11196.9 |
| dna replication and repair protein recf | DF947_08995 | Not Available | Negative | 2057275 - 2058378 | 42542.3 |
| hypothetical protein | DF947_09000 | Not Available | Positive | 2058504 - 2059169 | 24299.9 |
| aminoacyl-trna hydrolase | DF947_09005 | Not Available | Negative | 2059332 - 2059892 | 20617.1 |
| 50s ribosomal protein l25 | DF947_09010 | Not Available | Negative | 2060174 - 2060758 | 21271.2 |
| ribose-phosphate pyrophosphokinase | DF947_09015 | Not Available | Negative | 2060866 - 2061807 | 34125.4 |
| Trna-gln | Not Available | Not Available | Positive | 2061878 - 2061948 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

