Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacillithiol system redox-active protein ytxj | DF947_08875 | Not Available | Positive | 2033120 - 2033452 | 12589.0 |
| malate:quinone oxidoreductase | DF947_08880 | Not Available | Negative | 2033611 - 2035119 | 55941.5 |
| gnat family n-acetyltransferase | DF947_08885 | Not Available | Positive | 2035419 - 2035847 | 16368.8 |
| steroid delta-isomerase | DF947_08890 | Not Available | Positive | 2035851 - 2036207 | 13929.7 |
| short-chain dehydrogenase | DF947_08895 | Not Available | Positive | 2036330 - 2037631 | 49621.6 |
| lipoyl synthase | DF947_08900 | Not Available | Positive | 2038020 - 2038913 | 33237.3 |
| rna polymerase subunit sigma-70 | DF947_08905 | Not Available | Positive | 2039023 - 2039574 | 21005.5 |
| hypothetical protein | DF947_08910 | Not Available | Positive | 2039577 - 2040443 | 32130.5 |
| hypothetical protein | DF947_08915 | Not Available | Negative | 2040500 - 2041198 | 25159.4 |
| bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimerase | DF947_08920 | Not Available | Negative | 2041372 - 2042838 | 53748.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

