Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s12 methylthiotransferase rimo | DF947_08165 | Not Available | Positive | 1888671 - 1890008 | 50675.9 |
| hypothetical protein | DF947_08170 | Not Available | Positive | 1890163 - 1891230 | 41708.4 |
| hypothetical protein | DF947_08175 | Not Available | Negative | 1891296 - 1891640 | 12223.0 |
| glycerol-3-phosphate dehydrogenase | DF947_08180 | Not Available | Negative | 1891853 - 1892833 | 36503.0 |
| efflux rnd transporter periplasmic adaptor subunit | DF947_08185 | Not Available | Negative | 1892968 - 1894311 | 47860.2 |
| tolc family protein | DF947_08190 | Not Available | Negative | 1894442 - 1895800 | 50286.7 |
| polysaccharide deacetylase family protein | DF947_08195 | Not Available | Positive | 1895872 - 1896507 | 24379.3 |
| hypothetical protein | DF947_08200 | Not Available | Negative | 1896639 - 1897571 | 35840.9 |
| aconitate hydratase | DF947_08205 | Not Available | Positive | 1897779 - 1900052 | 81606.8 |
| hypothetical protein | DF947_08210 | Not Available | Positive | 1900169 - 1900696 | 18826.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

