Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3109 domain-containing protein | DF947_07910 | Not Available | Positive | 1823413 - 1823976 | 21401.8 |
| dna-binding protein | DF947_07915 | Not Available | Negative | 1824091 - 1824738 | 24610.5 |
| hypothetical protein | DF947_07920 | Not Available | Positive | 1824847 - 1825530 | 26535.6 |
| dtdp-glucose 4,6-dehydratase | DF947_07925 | Not Available | Positive | 1825661 - 1826710 | 39732.2 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | DF947_07930 | Not Available | Positive | 1826713 - 1827252 | 20252.9 |
| dtdp-4-dehydrorhamnose reductase | DF947_07935 | Not Available | Positive | 1827252 - 1828112 | 31499.5 |
| glucose-1-phosphate thymidylyltransferase | DF947_07940 | Not Available | Positive | 1828238 - 1829098 | 31241.9 |
| vi polysaccharide biosynthesis protein vipa/tvib | DF947_07945 | Not Available | Positive | 1829812 - 1831095 | 47456.3 |
| gdp-mannose 4,6-dehydratase | DF947_07950 | Not Available | Positive | 1831216 - 1832367 | 43721.3 |
| capsule biosynthesis protein | DF947_07955 | Not Available | Positive | 1832507 - 1834972 | 89977.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

