Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prevent-host-death protein | DF947_07710 | Not Available | Positive | 1785407 - 1785661 | 9844.92 |
| txe/yoeb family addiction module toxin | DF947_07715 | Not Available | Positive | 1785658 - 1785933 | 10570.0 |
| methyltransferase type 12 | DF947_07720 | Not Available | Positive | 1786033 - 1786779 | 28568.6 |
| alpha-l-fucosidase | DF947_07725 | Not Available | Negative | 1786784 - 1788235 | 54478.6 |
| hypothetical protein | DF947_07730 | Not Available | Positive | 1788328 - 1788534 | 7990.58 |
| hypothetical protein | DF947_07735 | Not Available | Positive | 1788534 - 1788824 | 11155.5 |
| sugar transferase | DF947_07740 | Not Available | Negative | 1788827 - 1789741 | 35066.8 |
| gxxexxy protein | DF947_07745 | Not Available | Negative | 1789805 - 1790215 | 15657.5 |
| class i sam-dependent methyltransferase | DF947_07750 | Not Available | Negative | 1790303 - 1791064 | 29343.4 |
| fkbm family methyltransferase | DF947_07755 | Not Available | Negative | 1791082 - 1791729 | 24055.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

