Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucosamine-6-phosphate deaminase | DF947_07210 | Not Available | Negative | 1658826 - 1660745 | 72247.0 |
| anhydro-n-acetylmuramic acid kinase | DF947_07215 | Not Available | Positive | 1660898 - 1662094 | 43699.3 |
| susc/raga family tonb-linked outer membrane protein | DF947_07220 | Not Available | Positive | 1662165 - 1665284 | 112492.0 |
| ragb/susd family protein | DF947_07225 | Not Available | Positive | 1665302 - 1666597 | 46414.4 |
| deor family transcriptional regulator | DF947_07230 | Not Available | Negative | 1666638 - 1667384 | 27479.5 |
| susc/raga family tonb-linked outer membrane protein | DF947_07235 | Not Available | Positive | 1667629 - 1670721 | 111547.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DF947_07240 | Not Available | Positive | 1670726 - 1672327 | 59454.3 |
| duf4397 domain-containing protein | DF947_07245 | Not Available | Positive | 1672343 - 1673107 | 27694.3 |
| tonb-dependent receptor | DF947_07250 | Not Available | Positive | 1673394 - 1676609 | 117282.0 |
| ragb/susd family nutrient uptake outer membrane protein | DF947_07255 | Not Available | Positive | 1676618 - 1678273 | 61609.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

