Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase accessory protein ccog | DF947_00640 | Not Available | Positive | 142766 - 144142 | 52719.7 |
| nitrogen fixation protein fixh | DF947_00645 | Not Available | Positive | 144172 - 144600 | 16290.0 |
| sulfite exporter taue/safe family protein | DF947_00650 | Not Available | Positive | 144600 - 145298 | 26071.6 |
| alpha-glucan family phosphorylase | DF947_00655 | Not Available | Positive | 145414 - 147075 | 63097.0 |
| fatty acid hydroxylase | DF947_00660 | Not Available | Negative | 147223 - 148080 | 33026.0 |
| hypothetical protein | DF947_00665 | Not Available | Negative | 148083 - 148547 | 17389.9 |
| hypothetical protein | DF947_00670 | Not Available | Positive | 148650 - 149219 | 21635.4 |
| short-chain dehydrogenase/reductase | DF947_00675 | Not Available | Positive | 149368 - 150222 | 31038.6 |
| arac family transcriptional regulator | DF947_00680 | Not Available | Positive | 150295 - 151218 | 35054.0 |
| hypothetical protein | DF947_00685 | Not Available | Negative | 151376 - 151714 | 12383.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

