Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lema family protein | DF947_06860 | Not Available | Negative | 1571690 - 1572247 | 20580.7 |
| hypothetical protein | DF947_06865 | Not Available | Negative | 1572300 - 1574117 | 69717.8 |
| hypothetical protein | DF947_06870 | Not Available | Negative | 1574205 - 1576013 | 67491.5 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | DF947_06875 | Not Available | Positive | 1576412 - 1577827 | 52947.1 |
| sigma-54-dependent fis family transcriptional regulator | DF947_06880 | Not Available | Positive | 1577949 - 1579196 | 46521.5 |
| hypothetical protein | DF947_06885 | Not Available | Positive | 1579227 - 1579739 | 18836.6 |
| hypothetical protein | DF947_06890 | Not Available | Positive | 1579832 - 1580908 | 41024.1 |
| preprotein translocase subunit secg | DF947_06895 | Not Available | Positive | 1580923 - 1581282 | 11815.6 |
| co-chaperone groes | DF947_06900 | Not Available | Positive | 1581748 - 1582038 | 10230.1 |
| chaperonin groel | DF947_06905 | Not Available | Positive | 1582111 - 1583748 | 57656.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

