Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | DF947_06810 | Not Available | Negative | 1559760 - 1560965 | 46113.6 |
| glutamate--trna ligase | DF947_06815 | Not Available | Positive | 1561179 - 1562687 | 56913.0 |
| metalloprotease | DF947_06820 | Not Available | Positive | 1562853 - 1563692 | 30616.7 |
| hybrid sensor histidine kinase/response regulator | DF947_06825 | Not Available | Positive | 1563797 - 1564930 | 42700.7 |
| histidine kinase | DF947_06830 | Not Available | Positive | 1564973 - 1568563 | 134080.0 |
| response regulator | DF947_06835 | Not Available | Positive | 1568582 - 1568953 | 13504.7 |
| chemotaxis protein cher | DF947_06840 | Not Available | Positive | 1568957 - 1569775 | 31797.1 |
| chemotaxis protein cheb | DF947_06845 | Not Available | Positive | 1569760 - 1570347 | 21304.7 |
| response regulator | DF947_06850 | Not Available | Positive | 1570375 - 1570737 | 13461.0 |
| galanin | DF947_06855 | Not Available | Negative | 1570734 - 1571690 | 35872.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

