Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase | DF947_06660 | Not Available | Positive | 1531751 - 1532449 | 26482.2 |
| exodeoxyribonuclease iii | DF947_06665 | Not Available | Positive | 1532449 - 1533216 | 29710.3 |
| 5-formyltetrahydrofolate cyclo-ligase | DF947_06670 | Not Available | Negative | 1533506 - 1534066 | 21429.0 |
| elongation factor p | DF947_06675 | Not Available | Negative | 1534465 - 1535025 | 20949.8 |
| elongation factor p | DF947_06680 | Not Available | Negative | 1535145 - 1535705 | 21193.1 |
| abc transporter atp-binding protein | DF947_06685 | Not Available | Negative | 1536307 - 1536921 | 23107.8 |
| gnat family n-acetyltransferase | DF947_06690 | Not Available | Negative | 1536943 - 1537413 | 17366.9 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | DF947_06695 | Not Available | Negative | 1537483 - 1538268 | 28576.5 |
| udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase | DF947_06700 | Not Available | Negative | 1538268 - 1539680 | 52254.5 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | DF947_06705 | Not Available | Negative | 1539670 - 1540746 | 38691.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

