Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | DF947_06510 | Not Available | Negative | 1493725 - 1495587 | 69124.1 |
| abc transporter | DF947_06515 | Not Available | Negative | 1495754 - 1497616 | 70544.0 |
| hypothetical protein | DF947_06520 | Not Available | Negative | 1497831 - 1498463 | 22479.4 |
| threonine aldolase | DF947_06525 | Not Available | Positive | 1498806 - 1499993 | 44230.2 |
| rrna maturation rnase ybey | DF947_06530 | Not Available | Negative | 1499990 - 1500430 | 16987.4 |
| hypothetical protein | DF947_06535 | Not Available | Negative | 1500672 - 1501112 | 16667.4 |
| hypothetical protein | DF947_06540 | Not Available | Negative | 1501127 - 1504438 | 126587.0 |
| licheninase | DF947_06545 | Not Available | Positive | 1504640 - 1506142 | 57212.1 |
| phospholipase c, phosphocholine-specific | DF947_06550 | Not Available | Positive | 1506200 - 1508575 | 88603.3 |
| hypothetical protein | DF947_06555 | Not Available | Negative | 1508817 - 1509386 | 21298.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

