Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DF947_00590 | Not Available | Positive | 130738 - 132507 | 67473.9 |
| pas domain-containing sensor histidine kinase | DF947_00595 | Not Available | Positive | 132562 - 133782 | 45859.9 |
| transcriptional regulator | DF947_00600 | Not Available | Positive | 133775 - 134806 | 38535.4 |
| lactate dehydrogenase | DF947_00605 | Not Available | Positive | 135081 - 135509 | 15498.8 |
| oxygen-independent coproporphyrinogen iii oxidase | DF947_00610 | Not Available | Positive | 135509 - 136855 | 51053.2 |
| heavy metal translocating p-type atpase | DF947_00615 | Not Available | Positive | 136867 - 139251 | 89480.3 |
| cbb3-type cytochrome oxidase assembly protein ccos | DF947_00620 | Not Available | Positive | 139248 - 139427 | 6689.91 |
| cytochrome c oxidase cbb3 | DF947_00625 | Not Available | Positive | 139500 - 141641 | 81177.1 |
| hypothetical protein | DF947_00630 | Not Available | Positive | 141645 - 141827 | 6990.69 |
| cytochrome c | DF947_00635 | Not Available | Positive | 141895 - 142782 | 33059.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

